******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.0.1 (Release date: Thu Jun 21 11:55:30 2018 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= seqs_ex9.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACDEFGHIKLMNPQRSTVWY Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ sp|P49927|PRIO_PIG 1.0000 257 sp|Q9GJY2|PRND_SHEEP 1.0000 178 sp|Q9GK16|PRND_BOVIN 1.0000 178 sp|A0RZB4|SPRN_BOVIN 1.0000 143 sp|Q5UAF1|PRIO_BISBI 1.0000 264 sp|Q5UJH0|PRIO_BOSGA 1.0000 264 sp|O46501|PRIO_CANFA 1.0000 255 sp|Q60506|PRIO_CRIGR 1.0000 254 sp|P40252|PRIO_GORGO 1.0000 253 sp|P67992|PRIO_MACFA 1.0000 253 sp|P67997|PRIO_MACMU 1.0000 253 sp|P40256|PRIO_PONPY 1.0000 253 sp|P52113|PRIO_CAPHI 1.0000 256 sp|Q86SH4|PRNT_HUMAN 1.0000 94 sp|P52114|PRIO_MUSPF 1.0000 257 sp|P51780|PRIO_TRIVU 1.0000 259 sp|Q5UJG7|PRIO_BOSTR 1.0000 264 sp|Q5UJH8|PRIO_BUBBU 1.0000 264 sp|Q5UJG3|PRIO_TRAIM 1.0000 264 sp|P40242|PRIO1_TRAST 1.0000 264 sp|Q9UKY0|PRND_HUMAN 1.0000 176 sp|P04156|PRIO_HUMAN 1.0000 253 sp|P04273|PRIO_MESAU 1.0000 254 sp|P04925|PRIO_MOUSE 1.0000 254 sp|P23907|PRIO_SHEEP 1.0000 256 sp|P10279|PRIO_BOVIN 1.0000 264 sp|P27177|PRIO_CHICK 1.0000 273 sp|P13852|PRIO_RAT 1.0000 254 sp|P61768|PRIO_PANTR 1.0000 253 sp|B5SY89|PRIO_BOBOX 1.0000 264 sp|Q9QUG3|PRND_MOUSE 1.0000 179 sp|Q5UJI7|PRIO_BOSIN 1.0000 264 sp|Q95211|PRIO_RABIT 1.0000 252 sp|P40258|PRIO_SAISC 1.0000 260 sp|P67986|PRIO_CEREN 1.0000 256 sp|O18754|PRIO_FELCA 1.0000 256 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme seqs_ex9.fasta -protein -oc . -nostatus -time 18000 -mod zoops -nmotifs 3 -minw 6 -maxw 50 -objfun classic -markov_order 0 model: mod= zoops nmotifs= 3 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values width: minw= 6 maxw= 50 nsites: minsites= 2 maxsites= 36 wnsites= 0.8 theta: spmap= pam spfuzz= 120 em: prior= megap b= 43475 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 8695 N= 36 sample: seed= 0 hsfrac= 0 searchsize= 8695 norand= no csites= 1000 Dirichlet mixture priors file: prior30.plib Letter frequencies in dataset: A 0.0492 C 0.0154 D 0.0242 E 0.0322 F 0.0283 G 0.167 H 0.0392 I 0.0378 K 0.0445 L 0.0535 M 0.0342 N 0.0472 P 0.065 Q 0.0612 R 0.0446 S 0.0567 T 0.0486 V 0.0645 W 0.0361 Y 0.0504 Background letter frequencies (from file dataset with add-one prior applied): A 0.0492 C 0.0154 D 0.0242 E 0.0322 F 0.0283 G 0.167 H 0.0392 I 0.0378 K 0.0445 L 0.0535 M 0.0342 N 0.0472 P 0.065 Q 0.0612 R 0.0446 S 0.0567 T 0.0487 V 0.0645 W 0.0361 Y 0.0504 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 width = 50 sites = 30 llr = 4337 E-value = 1.5e-1525 ******************************************************************************** -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::::::::::::::::::::::::::::::::::::::::::::::::: pos.-specific C :::::::::::::::::::::::::::::::::::::::::::::a:::: probability D ::::::::::9::a:::::::::::::::::::a::::::::::a::::: matrix E ::::::::::::a:::::a::::::::::::::::::::::::::::::: F :::::::a:::::::::::::::::::::::::::::::::a:::::::: G ::::::::a::::::::::::::::::::::::::::::::::::::::: H ::::::a::::::::::::::3:::::::::::::::::::::9:::::: I ::::19::::::::::::::::::::::::::::::::::::::::::a: K :::::::::::::::::::::::::::::::::::::::::::::::::: L ::::71:::::::::::::::::::::::::::::::::::::::::::: M a:::1:::::::::::::::9:::::::::::1::::::::::::::::: N :::::::::6:::::::::a:1:::a::::::::::19:98::::::a:: P :::a::::::::::::::::::::a::::::9:::::::::::::::::: Q ::::::::::::::::::::::::::a:::::::9:::a::::::::::: R ::a:::::::::::a::a::::a:::::::a::::::::::::::::::: S :a:::::::4::::::::::::::::::::::::::81::1::::::::: T ::::::::::::::::::::::::::::::::::::::::1::::::::a V :::::::::::::::::::::::::::a::::8:::::::::a:::a::: W :::::::::::1:::::::::::::::::::::::::::::::::::::: Y :::::::::::8:::aa::::6:a::::aa:::::a:::::::::::::: bits 6.0 * 5.4 * * * ** 4.8 * ** * ** * * * ** 4.2 *** *** * ********* **** **** * * ** ***** *** Relative 3.6 **** *** ************ ********** ***************** Entropy 3.0 ******** ***************************************** (208.6 bits) 2.4 ************************************************** 1.8 ************************************************** 1.2 ************************************************** 0.6 ************************************************** 0.0 -------------------------------------------------- Multilevel MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT consensus S H sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------------------------------------- sp|O18754|PRIO_FELCA 137 6.58e-68 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKQHTVTTTT sp|Q5UJG3|PRIO_TRAIM 145 6.58e-68 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKQHTVTTTT sp|P52113|PRIO_CAPHI 137 6.58e-68 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKQHTVTTTT sp|P67997|PRIO_MACMU 134 6.58e-68 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT IKQHTVTTTT sp|P67992|PRIO_MACFA 134 6.58e-68 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT IKQHTVTTTT sp|Q5UJH8|PRIO_BUBBU 145 1.17e-67 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKEHTVTTTT sp|P40242|PRIO1_TRAST 145 1.96e-67 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKQHTVTTTT sp|Q5UJI7|PRIO_BOSIN 145 2.58e-67 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKEHTVTTTT sp|B5SY89|PRIO_BOBOX 145 2.58e-67 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKEHTVTTTT sp|P10279|PRIO_BOVIN 145 2.58e-67 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKEHTVTTTT sp|Q5UJH0|PRIO_BOSGA 145 2.58e-67 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKEHTVTTTT sp|Q5UAF1|PRIO_BISBI 145 2.58e-67 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT VKEHTVTTTT sp|P40256|PRIO_PONPY 134 4.28e-67 GLGGYMLGSA MSRPIIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT IKQHTVTTTT sp|P04925|PRIO_MOUSE 133 2.15e-66 GLGGYMLGSA MSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT IKQHTVTTTT sp|Q95211|PRIO_RABIT 133 3.82e-66 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNIT VKQHTVTTTT sp|P23907|PRIO_SHEEP 137 4.34e-66 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDRYSNQNNFVHDCVNIT VKQHTVTTTT sp|P49927|PRIO_PIG 138 9.56e-66 GLGGYMLGSA MSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNIT VKQHTVTTTT sp|P40252|PRIO_GORGO 134 1.23e-65 GLGGYMLGSA MSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDQYSNQNNFVHDCVNIT IKQHTVTTTT sp|P67986|PRIO_CEREN 137 4.55e-65 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYNNQNTFVHDCVNIT VKQHTVTTTT sp|P13852|PRIO_RAT 134 7.81e-65 GLGGYMLGSA MSRPMLHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT IKQHTVTTTT sp|P04156|PRIO_HUMAN 134 3.08e-64 GLGGYMLGSA MSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNIT IKQHTVTTTT sp|P40258|PRIO_SAISC 141 3.50e-64 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPSQVYYRPVDQYSNQNNFVHDCVNVT IKQHTVTTTT sp|Q5UJG7|PRIO_BOSTR 145 3.50e-64 GLGGYMLGSA MNRPLIHFGNDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVRDCVNIT VKEHTVTTTT sp|P52114|PRIO_MUSPF 138 4.51e-64 GLGGYMLGSA MSRPLIHFGNDYEDRYYRENMYRYPNQVYYKPVDQYSNQNNLVHDCVNIT VKQHTVTTTT sp|P61768|PRIO_PANTR 134 7.31e-64 GLGGYMLGSA MSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDQYSSQNNFVHDCVNIT IKQHTVTTTT sp|Q60506|PRIO_CRIGR 134 6.20e-63 GLGGYMLGSA MSRPMLHFGNDWEDRYYRENMNRYPNQVYYRPVDQYNNQNNFVHDCVNIT IKQHTVTTTT sp|P04273|PRIO_MESAU 134 1.11e-62 GLGGYMLGSA MSRPMMHFGNDWEDRYYRENMNRYPNQVYYRPVDQYNNQNNFVHDCVNIT IKQHTVTTTT sp|O46501|PRIO_CANFA 137 8.78e-61 GLGGYLLGSA MSRPLIHFGNDCEDRYYRENMYRYPNQVYYRSVDQYNNQSTFVHDCVNIT VKQHTVTTTK sp|P51780|PRIO_TRIVU 139 6.00e-58 GLGGYMLGSA MSRPVIHFGNEYEDRYYRENQYRYPNQVMYRPIDQYSSQNNFVHDCVNIT VKQHTTTTTT sp|P27177|PRIO_CHICK 147 1.51e-35 GLGGYAMGRV MSGMNYHFDSPDEYRWWSENSARYPNRVYYRDYSSPVPQDVFVADCFNIT VTEYSIGPAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|O18754|PRIO_FELCA 6.6e-68 136_[1]_70 sp|Q5UJG3|PRIO_TRAIM 6.6e-68 144_[1]_70 sp|P52113|PRIO_CAPHI 6.6e-68 136_[1]_70 sp|P67997|PRIO_MACMU 6.6e-68 133_[1]_70 sp|P67992|PRIO_MACFA 6.6e-68 133_[1]_70 sp|Q5UJH8|PRIO_BUBBU 1.2e-67 144_[1]_70 sp|P40242|PRIO1_TRAST 2e-67 144_[1]_70 sp|Q5UJI7|PRIO_BOSIN 2.6e-67 144_[1]_70 sp|B5SY89|PRIO_BOBOX 2.6e-67 144_[1]_70 sp|P10279|PRIO_BOVIN 2.6e-67 144_[1]_70 sp|Q5UJH0|PRIO_BOSGA 2.6e-67 144_[1]_70 sp|Q5UAF1|PRIO_BISBI 2.6e-67 144_[1]_70 sp|P40256|PRIO_PONPY 4.3e-67 133_[1]_70 sp|P04925|PRIO_MOUSE 2.2e-66 132_[1]_72 sp|Q95211|PRIO_RABIT 3.8e-66 132_[1]_70 sp|P23907|PRIO_SHEEP 4.3e-66 136_[1]_70 sp|P49927|PRIO_PIG 9.6e-66 137_[1]_70 sp|P40252|PRIO_GORGO 1.2e-65 133_[1]_70 sp|P67986|PRIO_CEREN 4.5e-65 136_[1]_70 sp|P13852|PRIO_RAT 7.8e-65 133_[1]_71 sp|P04156|PRIO_HUMAN 3.1e-64 133_[1]_70 sp|P40258|PRIO_SAISC 3.5e-64 140_[1]_70 sp|Q5UJG7|PRIO_BOSTR 3.5e-64 144_[1]_70 sp|P52114|PRIO_MUSPF 4.5e-64 137_[1]_70 sp|P61768|PRIO_PANTR 7.3e-64 133_[1]_70 sp|Q60506|PRIO_CRIGR 6.2e-63 133_[1]_71 sp|P04273|PRIO_MESAU 1.1e-62 133_[1]_71 sp|O46501|PRIO_CANFA 8.8e-61 136_[1]_69 sp|P51780|PRIO_TRIVU 6e-58 138_[1]_71 sp|P27177|PRIO_CHICK 1.5e-35 146_[1]_77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT width=50 seqs=30 sp|O18754|PRIO_FELCA ( 137) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|Q5UJG3|PRIO_TRAIM ( 145) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P52113|PRIO_CAPHI ( 137) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P67997|PRIO_MACMU ( 134) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P67992|PRIO_MACFA ( 134) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|Q5UJH8|PRIO_BUBBU ( 145) MSRPLIHFGNDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P40242|PRIO1_TRAST ( 145) MSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|Q5UJI7|PRIO_BOSIN ( 145) MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|B5SY89|PRIO_BOBOX ( 145) MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P10279|PRIO_BOVIN ( 145) MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|Q5UJH0|PRIO_BOSGA ( 145) MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|Q5UAF1|PRIO_BISBI ( 145) MSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P40256|PRIO_PONPY ( 134) MSRPIIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P04925|PRIO_MOUSE ( 133) MSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|Q95211|PRIO_RABIT ( 133) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNIT 1 sp|P23907|PRIO_SHEEP ( 137) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDRYSNQNNFVHDCVNIT 1 sp|P49927|PRIO_PIG ( 138) MSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNIT 1 sp|P40252|PRIO_GORGO ( 134) MSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDQYSNQNNFVHDCVNIT 1 sp|P67986|PRIO_CEREN ( 137) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYNNQNTFVHDCVNIT 1 sp|P13852|PRIO_RAT ( 134) MSRPMLHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT 1 sp|P04156|PRIO_HUMAN ( 134) MSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNIT 1 sp|P40258|PRIO_SAISC ( 141) MSRPLIHFGNDYEDRYYRENMYRYPSQVYYRPVDQYSNQNNFVHDCVNVT 1 sp|Q5UJG7|PRIO_BOSTR ( 145) MNRPLIHFGNDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVRDCVNIT 1 sp|P52114|PRIO_MUSPF ( 138) MSRPLIHFGNDYEDRYYRENMYRYPNQVYYKPVDQYSNQNNLVHDCVNIT 1 sp|P61768|PRIO_PANTR ( 134) MSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDQYSSQNNFVHDCVNIT 1 sp|Q60506|PRIO_CRIGR ( 134) MSRPMLHFGNDWEDRYYRENMNRYPNQVYYRPVDQYNNQNNFVHDCVNIT 1 sp|P04273|PRIO_MESAU ( 134) MSRPMMHFGNDWEDRYYRENMNRYPNQVYYRPVDQYNNQNNFVHDCVNIT 1 sp|O46501|PRIO_CANFA ( 137) MSRPLIHFGNDCEDRYYRENMYRYPNQVYYRSVDQYNNQSTFVHDCVNIT 1 sp|P51780|PRIO_TRIVU ( 139) MSRPVIHFGNEYEDRYYRENQYRYPNQVMYRPIDQYSSQNNFVHDCVNIT 1 sp|P27177|PRIO_CHICK ( 147) MSGMNYHFDSPDEYRWWSENSARYPNRVYYRDYSSPVPQDVFVADCFNIT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 50 n= 6931 bayes= 7.63057 E= 1.5e-1525 -462 -405 -477 -514 -415 -709 -603 -284 -523 -217 481 -567 -610 -610 -576 -509 -480 -402 -538 -474 -320 -421 -361 -487 -583 -598 -595 -618 -534 -599 -653 -46 -608 -615 -560 405 -285 -594 -775 -667 -361 -322 -391 -421 -476 -315 -339 -417 -163 -394 -491 -396 -469 -363 437 -403 -418 -537 -507 -536 -251 -429 -335 -338 -452 -594 -495 -430 -373 -390 -30 -463 383 -451 -410 -328 -364 -447 -694 -600 -329 -325 -432 -373 -172 -669 -480 137 -407 373 145 -113 -498 -431 -383 -418 -346 -90 -508 -430 -346 -365 -406 -421 -231 -686 -565 436 -436 63 -16 -478 -585 -528 -476 -431 -347 -32 -558 -112 -786 -708 -664 -785 -728 -845 467 -881 -816 -778 -945 -794 -787 -843 -762 -798 -802 -908 -867 -791 -612 -540 -596 -657 512 -805 -677 -536 -703 -444 -605 -711 -713 -776 -692 -632 -681 -619 -633 -436 -229 -390 -1 -320 -471 247 -470 -468 -359 -490 -506 -314 -513 -500 -370 -299 -411 -477 -588 -539 -362 -484 -226 -379 -615 -557 -504 -677 -466 -643 -723 371 -607 -545 -541 266 -434 -637 -808 -650 -288 -362 518 14 -382 -520 -349 -367 -363 -380 -446 -109 -264 -416 -379 -310 -367 -404 -554 -450 -579 105 41 -600 -108 -805 -386 -491 -605 -417 -540 -551 -709 -610 -564 -565 -585 -556 183 395 -459 -545 -124 491 -565 -670 -545 -493 -541 -560 -620 -448 -688 -453 -551 -529 -529 -573 -724 -659 -337 -407 523 -78 -417 -564 -396 -416 -411 -427 -495 -159 -559 -465 -426 -359 -415 -453 -593 -150 -516 -472 -521 -567 -608 -722 -496 -574 -328 -544 -649 -550 -607 -522 446 -556 -568 -685 -654 -674 -620 -531 -599 -633 -133 -822 -412 -518 -633 -441 -567 -578 -728 -634 -589 -598 -614 -584 -8 422 -620 -531 -599 -633 -133 -822 -412 -518 -633 -441 -567 -578 -728 -634 -589 -598 -614 -584 -8 422 -326 -289 -360 -387 -444 -572 -305 -382 -128 -360 -457 -362 -437 -328 436 -183 -384 -503 -473 -504 -459 -545 -124 491 -565 -670 -545 -493 -541 -560 -620 -448 -688 -453 -551 -529 -529 -573 -724 -659 -630 -600 -447 -631 -638 -757 -532 -632 -619 -659 -740 439 -706 -673 -642 -515 -584 -719 -775 -725 -396 -342 -422 -453 -355 -661 -548 -218 -460 -152 476 -506 -558 -333 -520 -295 -416 -337 -475 -410 -58 -497 -357 -475 -129 -684 301 -502 -514 -431 -550 48 -666 -563 -526 -463 -517 -559 -401 345 -516 -472 -521 -567 -608 -722 -496 -574 -328 -544 -649 -550 -607 -522 446 -556 -568 -685 -654 -674 -748 -666 -660 -758 -392 -843 -638 -735 -774 -651 -793 -751 -779 -807 -729 -751 -758 -790 -646 430 -621 -672 -615 -681 -722 -813 -761 -778 -713 -709 -854 -761 394 -784 -709 -679 -701 -797 -867 -832 -334 -324 -130 -336 -353 -508 -199 -300 -305 -370 -415 424 -457 -355 -353 -104 -263 -402 -501 -440 -315 -387 -350 -142 -461 -647 -202 -412 -322 -312 -325 -354 -469 388 -72 -369 -380 -461 -547 -551 -579 -572 -660 -740 -622 -832 -806 -343 -779 -506 -646 -787 -773 -853 -759 -719 -629 394 -871 -795 -612 -537 -605 -642 -149 -820 -428 -501 -643 -423 -6 -590 -731 -645 -599 -604 -618 -577 -420 422 -748 -666 -660 -758 -392 -843 -638 -735 -774 -651 -793 -751 -779 -807 -729 -751 -758 -790 -646 430 -315 -275 -347 -371 -431 -560 -289 -367 -58 -346 -441 -347 -423 -311 435 -357 -370 -489 -459 -489 -186 -371 13 -271 -396 -536 -431 -369 -306 -332 -444 -394 375 -385 -346 -83 -298 -384 -644 -546 -287 -329 -491 -481 -348 -741 -610 43 -538 -217 136 -582 -612 -629 -536 -513 -348 362 -695 -79 -314 -388 522 -58 -411 -543 -377 -398 -390 -411 -477 -139 -541 -445 -407 -156 -393 -435 -583 -479 -225 -300 -264 2 -377 -575 -108 -321 -252 -220 -231 -264 -382 377 -115 -171 -292 -371 -460 -471 -698 -638 -648 -734 -332 -833 -590 -688 -747 -608 -743 -714 -97 -773 -704 -708 -724 -743 -592 425 -203 -322 -290 -411 -517 -502 -530 -518 -465 -521 -565 141 -531 -537 -493 381 -220 -99 -726 -608 -321 -310 -116 -323 -339 -495 -183 -285 -290 -356 -400 420 -245 -340 -338 -67 -248 -388 -487 -425 -691 -674 -635 -589 -732 -831 -638 -796 -724 -696 -770 -736 -753 402 -681 -729 -737 -833 -843 -823 -325 -311 -28 -318 -338 -493 -182 -284 -288 -355 -399 421 -442 -339 -337 -108 -247 -388 -486 -424 -317 -306 -116 -325 -335 -495 -180 -280 -288 -352 -396 417 -440 -338 -336 -71 -95 -235 -483 -423 -323 -252 -369 -385 498 -632 -484 -215 -446 -58 -283 -469 -485 -543 -472 -345 -419 -306 -363 -160 -579 -572 -660 -740 -622 -832 -806 -343 -779 -506 -646 -787 -773 -853 -759 -719 -629 394 -871 -795 -99 -319 -213 -280 -247 -559 442 -410 -358 -310 -362 -164 -459 -180 -58 -278 -312 -416 -448 -190 -580 -607 535 -345 -642 -752 -630 -664 -644 -648 -743 -425 -723 -700 -642 -599 -644 -699 -790 -719 -351 597 -441 -429 -452 -693 -566 -393 -527 -433 -473 -525 -606 -592 -488 -463 -399 -498 -710 -623 -379 -404 -574 -581 21 -792 -665 -139 -634 -289 -423 -659 -691 -717 -634 -588 -437 385 -705 -522 -630 -600 -447 -631 -638 -757 -532 -632 -619 -659 -740 439 -706 -673 -642 -515 -584 -719 -775 -725 -411 -394 -622 -622 -421 -852 -825 460 -666 -254 -393 -686 -751 -775 -721 -632 -437 -20 -830 -665 -639 -649 -649 -757 -737 -816 -789 -771 -774 -747 -848 -746 -767 -834 -744 -610 435 -784 -869 -839 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 50 nsites= 30 E= 1.5e-1525 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.933333 0.000000 0.000000 0.033333 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.000000 0.000000 0.000000 0.066667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.566667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 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0.000000 0.000000 0.000000 0.900000 0.033333 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.133333 0.000000 0.000000 0.000000 0.833333 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.900000 0.033333 0.000000 0.000000 0.066667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.933333 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.833333 0.000000 0.000000 0.000000 0.066667 0.066667 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.933333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT MEME-1 regular expression -------------------------------------------------------------------------------- MSRPLIHFG[NS]DYEDRYYRENM[YH]RYPNQVYYRPVDQYSNQNNFVHDCVNIT -------------------------------------------------------------------------------- Time 9.70 secs. ******************************************************************************** ******************************************************************************** MOTIF QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 width = 42 sites = 29 llr = 3572 E-value = 8.8e-1249 ******************************************************************************** -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::::::::::::::::::::::::::::::::::::a11: pos.-specific C ::::::::::::::::::::::::::::a::::::::::::: probability D ::::::::::::::::a::::::::::::::::::::::::1 matrix E 2:::::::::a:::a::::::a:::a:::::::2:a:3:::: F ::::::::::::a::::::::::::::::::::::::::::: G :::::::::a:::::::::::::::::::::::::::::::: H :a:::::::::::::::::::::::::::::::::::::::: I :::::::::::::::::6:2:::::::::8:::::::::::: K ::::::::a:::::::::a:::::::::::::::3::::::: L :::::::::::::::::::::::::::::::::::::::::: M :::::::::::::::::1:8a::::::a:::::::::::::: N :::::::::::a:::::::::::::::::::::::::::::: P :::::::::::::::::::::::::::::::::::::::::: Q 7:::::::::::::::::::::::::a::::a:81::7:::9 R ::::::::::::::::::::::a:::::::::::6::::::: S ::::::::::::::::::::::::::::::::::::9::::: T ::a1aaaa:::::a:a::::::::::::::a::::::::::: V :::9:::::::::::::4:::::aa::::2:::::::::::: W :::::::::::::::::::::::::::::::::::::::::: Y ::::::::::::::::::::::::::::::::a:::1::99: bits 6.0 * 5.4 * * * 4.8 * * * * ** * ** * 4.2 ** ***** ******* *********** *** * *** Relative 3.6 ******** ******* **************** ******* Entropy 3.0 ********* ******************************** (177.7 bits) 2.4 ****************************************** 1.8 ****************************************** 1.2 ****************************************** 0.6 ****************************************** 0.0 ------------------------------------------ Multilevel QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ consensus E V I EK E sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------------------------------------ sp|P67986|PRIO_CEREN 189 6.18e-57 VHDCVNITVK QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ RGASVILFSS sp|P40242|PRIO1_TRAST 197 6.18e-57 VHDCVNITVK QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ RGASVILFSS sp|Q5UJG3|PRIO_TRAIM 197 6.18e-57 VHDCVNITVK QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ RGASVILFSS sp|Q5UJI7|PRIO_BOSIN 197 8.30e-57 VHDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|B5SY89|PRIO_BOBOX 197 8.30e-57 VHDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|P10279|PRIO_BOVIN 197 8.30e-57 VHDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|Q5UJH8|PRIO_BUBBU 197 8.30e-57 VHDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|Q5UJH0|PRIO_BOSGA 197 8.30e-57 VHDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|Q5UAF1|PRIO_BISBI 197 8.30e-57 VHDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|P23907|PRIO_SHEEP 189 4.34e-56 VHDCVNITVK QHTVTTTTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ RGASVILFSS sp|P52113|PRIO_CAPHI 189 4.34e-56 VHDCVNITVK QHTVTTTTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ RGASVILFSP sp|P61768|PRIO_PANTR 186 6.18e-56 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ RGSSMVLFSS sp|P04156|PRIO_HUMAN 186 6.18e-56 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ RGSSMVLFSS sp|P40256|PRIO_PONPY 186 6.18e-56 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ RGSSMVLFSS sp|P40252|PRIO_GORGO 186 6.18e-56 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ RGSSMVLFSS sp|P40258|PRIO_SAISC 193 1.02e-55 VHDCVNVTIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQ RGSSMVLFSS sp|P67997|PRIO_MACMU 186 1.02e-55 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQ RGSSMVLFSS sp|P67992|PRIO_MACFA 186 1.02e-55 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQ RGSSMVLFSS sp|Q5UJG7|PRIO_BOSTR 197 4.42e-55 VRDCVNITVK EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQTESQAYYQ RGASVVLFSS sp|P13852|PRIO_RAT 186 1.41e-54 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD GRRSSAVLFS sp|P04925|PRIO_MOUSE 185 1.41e-54 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD GRRSSSTVLF sp|Q60506|PRIO_CRIGR 186 1.41e-54 VHDCVNITIK QHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD GRRSSAVLFS sp|O18754|PRIO_FELCA 189 6.56e-54 VHDCVNITVK QHTVTTTTKGENFTETDMKIMERVVEQMCVTQYQKESEAYYQ RRASAILFSS sp|Q95211|PRIO_RABIT 185 7.31e-54 VHDCVNITVK QHTVTTTTKGENFTETDIKIMERVVEQMCITQYQQESQAAYQ RAAGVLLFSS sp|P04273|PRIO_MESAU 186 8.98e-54 VHDCVNITIK QHTVTTTTKGENFTETDIKIMERVVEQMCTTQYQKESQAYYD GRRSSAVLFS sp|P52114|PRIO_MUSPF 190 3.99e-53 VHDCVNITVK QHTVTTTTKGENFTETDMKIMERVVEQMCVTQYQQESEAYYQ RGASAILFSP sp|P49927|PRIO_PIG 190 1.04e-51 VHDCVNITVK QHTVTTTTKGENFTETDVKMIERVVEQMCITQYQKEYEAYAQ RGASVILFSS sp|P51780|PRIO_TRIVU 191 1.60e-50 VHDCVNITVK QHTTTTTTKGENFTETDIKIMERVVEQMCITQYQAEYEAAAQ RAYNMAFFSA sp|O46501|PRIO_CANFA 188 5.71e-50 FVHDCVNITV KQHTVTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ RGASVILFSS -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|P67986|PRIO_CEREN 6.2e-57 188_[2]_26 sp|P40242|PRIO1_TRAST 6.2e-57 196_[2]_26 sp|Q5UJG3|PRIO_TRAIM 6.2e-57 196_[2]_26 sp|Q5UJI7|PRIO_BOSIN 8.3e-57 196_[2]_26 sp|B5SY89|PRIO_BOBOX 8.3e-57 196_[2]_26 sp|P10279|PRIO_BOVIN 8.3e-57 196_[2]_26 sp|Q5UJH8|PRIO_BUBBU 8.3e-57 196_[2]_26 sp|Q5UJH0|PRIO_BOSGA 8.3e-57 196_[2]_26 sp|Q5UAF1|PRIO_BISBI 8.3e-57 196_[2]_26 sp|P23907|PRIO_SHEEP 4.3e-56 188_[2]_26 sp|P52113|PRIO_CAPHI 4.3e-56 188_[2]_26 sp|P61768|PRIO_PANTR 6.2e-56 185_[2]_26 sp|P04156|PRIO_HUMAN 6.2e-56 185_[2]_26 sp|P40256|PRIO_PONPY 6.2e-56 185_[2]_26 sp|P40252|PRIO_GORGO 6.2e-56 185_[2]_26 sp|P40258|PRIO_SAISC 1e-55 192_[2]_26 sp|P67997|PRIO_MACMU 1e-55 185_[2]_26 sp|P67992|PRIO_MACFA 1e-55 185_[2]_26 sp|Q5UJG7|PRIO_BOSTR 4.4e-55 196_[2]_26 sp|P13852|PRIO_RAT 1.4e-54 185_[2]_27 sp|P04925|PRIO_MOUSE 1.4e-54 184_[2]_28 sp|Q60506|PRIO_CRIGR 1.4e-54 185_[2]_27 sp|O18754|PRIO_FELCA 6.6e-54 188_[2]_26 sp|Q95211|PRIO_RABIT 7.3e-54 184_[2]_26 sp|P04273|PRIO_MESAU 9e-54 185_[2]_27 sp|P52114|PRIO_MUSPF 4e-53 189_[2]_26 sp|P49927|PRIO_PIG 1e-51 189_[2]_26 sp|P51780|PRIO_TRIVU 1.6e-50 190_[2]_27 sp|O46501|PRIO_CANFA 5.7e-50 187_[2]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ width=42 seqs=29 sp|P67986|PRIO_CEREN ( 189) QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ 1 sp|P40242|PRIO1_TRAST ( 197) QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ 1 sp|Q5UJG3|PRIO_TRAIM ( 197) QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ 1 sp|Q5UJI7|PRIO_BOSIN ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ 1 sp|B5SY89|PRIO_BOBOX ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ 1 sp|P10279|PRIO_BOVIN ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ 1 sp|Q5UJH8|PRIO_BUBBU ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ 1 sp|Q5UJH0|PRIO_BOSGA ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ 1 sp|Q5UAF1|PRIO_BISBI ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ 1 sp|P23907|PRIO_SHEEP ( 189) QHTVTTTTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ 1 sp|P52113|PRIO_CAPHI ( 189) QHTVTTTTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ 1 sp|P61768|PRIO_PANTR ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ 1 sp|P04156|PRIO_HUMAN ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ 1 sp|P40256|PRIO_PONPY ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ 1 sp|P40252|PRIO_GORGO ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ 1 sp|P40258|PRIO_SAISC ( 193) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQ 1 sp|P67997|PRIO_MACMU ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQ 1 sp|P67992|PRIO_MACFA ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQ 1 sp|Q5UJG7|PRIO_BOSTR ( 197) EHTVTTTTKGENFTETDIKMMERVVEQMCITQYQTESQAYYQ 1 sp|P13852|PRIO_RAT ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD 1 sp|P04925|PRIO_MOUSE ( 185) QHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD 1 sp|Q60506|PRIO_CRIGR ( 186) QHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD 1 sp|O18754|PRIO_FELCA ( 189) QHTVTTTTKGENFTETDMKIMERVVEQMCVTQYQKESEAYYQ 1 sp|Q95211|PRIO_RABIT ( 185) QHTVTTTTKGENFTETDIKIMERVVEQMCITQYQQESQAAYQ 1 sp|P04273|PRIO_MESAU ( 186) QHTVTTTTKGENFTETDIKIMERVVEQMCTTQYQKESQAYYD 1 sp|P52114|PRIO_MUSPF ( 190) QHTVTTTTKGENFTETDMKIMERVVEQMCVTQYQQESEAYYQ 1 sp|P49927|PRIO_PIG ( 190) QHTVTTTTKGENFTETDVKMIERVVEQMCITQYQKEYEAYAQ 1 sp|P51780|PRIO_TRIVU ( 191) QHTTTTTTKGENFTETDIKIMERVVEQMCITQYQAEYEAAAQ 1 sp|O46501|PRIO_CANFA ( 188) KQHTVTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 42 n= 7219 bayes= 9.64586 E= 8.8e-1249 -295 -555 -84 292 -579 -612 -362 -472 -23 -416 -453 -367 -488 344 -304 -372 -383 -475 -701 -608 -463 -433 -325 -397 -354 -663 455 -525 -493 -424 -481 -283 -564 -77 -337 -401 -433 -536 -554 -304 -455 -485 -502 -581 -564 -733 -25 -527 -567 -588 -591 -501 -669 -638 -579 -325 428 -546 -754 -664 -289 -347 -510 -512 -425 -699 -647 -109 -570 -293 -418 -599 -622 -663 -567 -477 40 378 -761 -651 -294 -343 -415 -470 -464 -629 -561 -317 -450 -425 -434 -378 -566 -515 -466 -179 423 -87 -674 -611 -629 -640 -642 -749 -729 -810 -782 -758 -764 -739 -836 -735 -761 -825 -736 -596 435 -772 -862 -832 -629 -640 -642 -749 -729 -810 -782 -758 -764 -739 -836 -735 -761 -825 -736 -596 435 -772 -862 -832 -629 -640 -642 -749 -729 -810 -782 -758 -764 -739 -836 -735 -761 -825 -736 -596 435 -772 -862 -832 -435 -462 -477 -468 -591 -700 -562 -478 444 -525 -572 -488 -603 -564 -167 -529 -488 -593 -671 -648 -451 -569 -444 -539 -647 256 -660 -677 -576 -666 -721 -538 -679 -701 -577 -518 -611 -686 -763 -725 -458 -544 -123 491 -564 -669 -543 -492 -540 -559 -619 -447 -686 -451 -550 -527 -528 -571 -723 -658 -616 -587 -431 -617 -624 -746 -515 -614 -603 -645 -724 439 -695 -657 -628 -497 -568 -703 -762 -711 -597 -525 -585 -644 512 -797 -667 -519 -690 -427 -588 -699 -702 -765 -682 -617 -668 -603 -619 -421 -629 -640 -642 -749 -729 -810 -782 -758 -764 -739 -836 -735 -761 -825 -736 -596 435 -772 -862 -832 -458 -544 -123 491 -564 -669 -543 -492 -540 -559 -619 -447 -686 -451 -550 -527 -528 -571 -723 -658 -629 -640 -642 -749 -729 -810 -782 -758 -764 -739 -836 -735 -761 -825 -736 -596 435 -772 -862 -832 -564 -595 535 -328 -629 -741 -616 -648 -629 -635 -727 -407 -713 -685 -629 -584 -629 -683 -779 -705 -403 -385 -610 -609 -409 -846 -811 383 -652 -241 94 -673 -742 -760 -707 -622 -427 253 -815 -653 -435 -462 -477 -468 -591 -700 -562 -478 444 -525 -572 -488 -603 -564 -167 -529 -488 -593 -671 -648 -472 -452 -693 -676 -296 -875 -752 266 -714 -146 439 -745 -751 -713 -701 -681 -503 -241 -673 -593 -401 -343 -424 -454 -351 -665 -549 -148 -462 -149 477 -508 -559 -551 -522 -449 -418 -334 -475 -411 -458 -544 -123 491 -564 -669 -543 -492 -540 -559 -619 -447 -686 -451 -550 -527 -528 -571 -723 -658 -504 -460 -511 -556 -597 -713 -483 -561 -315 -532 -636 -538 -596 -510 445 -544 -556 -673 -642 -663 -567 -563 -654 -731 -613 -826 -799 -332 -771 -497 -636 -779 -767 -846 -752 -710 -619 394 -865 -788 -567 -563 -654 -731 -613 -826 -799 -332 -771 -497 -636 -779 -767 -846 -752 -710 -619 394 -865 -788 -458 -544 -123 491 -564 -669 -543 -492 -540 -559 -619 -447 -686 -451 -550 -527 -528 -571 -723 -658 -676 -664 -625 -568 -722 -824 -618 -781 -709 -680 -749 -721 -744 402 -666 -716 -724 -818 -833 -813 -456 -399 -473 -509 -409 -705 -598 -278 -518 -212 481 -562 -606 -605 -572 -504 -475 -397 -533 -469 -349 597 -439 -428 -450 -691 -564 -391 -525 -431 -471 -524 -604 -590 -486 -461 -397 -496 -708 -621 -338 -346 -430 -446 -319 -707 -619 429 -465 -108 -249 -503 -614 -578 -516 -455 -77 143 -643 -501 -629 -640 -642 -749 -729 -810 -782 -758 -764 -739 -836 -735 -761 -825 -736 -596 435 -772 -862 -832 -676 -664 -625 -568 -722 -824 -618 -781 -709 -680 -749 -721 -744 402 -666 -716 -724 -818 -833 -813 -742 -660 -654 -752 -384 -838 -631 -727 -768 -644 -785 -744 -774 -801 -722 -744 -752 -782 -638 430 -384 -608 -174 291 -636 -681 -456 -568 -364 -508 -550 -458 -568 357 -451 -461 -477 -569 -768 -684 -51 -500 -415 -283 -568 -635 -373 -456 280 -402 -465 -374 -569 21 354 -396 -49 -485 -641 -538 -458 -544 -123 491 -564 -669 -543 -492 -540 -559 -619 -447 -686 -451 -550 -527 -528 -571 -723 -658 -430 -511 -554 -646 -377 -706 -606 -657 -671 -602 -704 -596 -693 -719 -651 401 -455 -656 -630 48 -383 -660 -156 313 -665 -679 -521 -585 -358 -540 -594 -466 -573 349 -472 -465 -480 -574 -817 -699 433 -510 -629 -704 -694 -693 -768 -727 -753 -692 -778 -713 -704 -785 -712 -492 -561 -659 -848 -811 49 -524 -609 -667 -247 -740 -514 -591 -684 -526 -646 -633 -713 -698 -643 -537 -585 -622 -513 418 49 -524 -609 -667 -247 -740 -514 -591 -684 -526 -646 -633 -713 -698 -643 -537 -585 -622 -513 418 -604 -646 249 -434 -701 -753 -594 -759 -603 -672 -745 -532 -714 380 -623 -594 -641 -783 -829 -769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 42 nsites= 29 E= 8.8e-1249 0.000000 0.000000 0.000000 0.241379 0.000000 0.000000 0.000000 0.000000 0.034483 0.000000 0.000000 0.000000 0.000000 0.724138 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.965517 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.034483 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.034483 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.965517 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.068966 0.931034 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.965517 0.034483 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.551724 0.000000 0.000000 0.068966 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.379310 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.241379 0.000000 0.000000 0.758621 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.034483 0.000000 0.000000 0.965517 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.793103 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.034483 0.172414 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.241379 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.758621 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.034483 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.310345 0.000000 0.000000 0.000000 0.000000 0.068966 0.551724 0.000000 0.034483 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.931034 0.000000 0.000000 0.000000 0.068966 0.000000 0.000000 0.000000 0.275862 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.724138 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.068966 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.931034 0.068966 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.931034 0.000000 0.000000 0.137931 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.862069 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif QHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ MEME-2 regular expression -------------------------------------------------------------------------------- [QE]HTVTTTTKGENFTETD[IV]K[MI]MERVVEQMCITQY[QE][RK]ES[QE]AYYQ -------------------------------------------------------------------------------- Time 17.02 secs. ******************************************************************************** ******************************************************************************** MOTIF KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 width = 29 sites = 30 llr = 2325 E-value = 3.2e-756 ******************************************************************************** -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::::::::a:aaaa:a::::::::: pos.-specific C ::::::::::::::::::::::::::::: probability D ::::::::::::::::::::::::::::: matrix E ::::::::::::::::::::::::::::: F ::::::::::::::::::::::::::::: G :::::::::::::a::::a:::aa:aa:: H ::::::::::a:::::::::::::::::: I ::::::::::::::::::::::::::::: K a::a:a:::a::::::::::::::::::: L ::::::::1:::::::::::::::a:::: M ::::::::9::3::::::::::::::::9 N :::::::9::::::::::::::::::::: P :a::a:::::::::::::::::::::::: Q ::::::::::::::::::::::::::::: R ::::::::::::::::::::::::::::: S ::9::::1::::::::::::::::::::: T ::::::a:::::::::::::::::::::: V :::::::::::7::::::::aa::::::: W ::::::::::::::::::::::::::::: Y :::::::::::::::::::::::::::a: bits 6.0 5.4 4.8 * 4.2 * **** *** * **** *** * ** Relative 3.6 ************* **** *** * ** Entropy 3.0 ************* **** *** * ** (111.8 bits) 2.4 ***************************** 1.8 ***************************** 1.2 ***************************** 0.6 ***************************** 0.0 ----------------------------- Multilevel KPSKPKTNMKHVAGAAAAGAVVGGLGGYM consensus M sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ----------------------------- sp|P67986|PRIO_CEREN 104 2.20e-35 GQGGTHSQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|Q5UJI7|PRIO_BOSIN 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|B5SY89|PRIO_BOBOX 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P10279|PRIO_BOVIN 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P23907|PRIO_SHEEP 104 2.20e-35 GQGGSHSQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P40242|PRIO1_TRAST 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|Q5UJG3|PRIO_TRAIM 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|Q5UJG7|PRIO_BOSTR 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMNRPLI sp|P52114|PRIO_MUSPF 105 2.20e-35 QGGGSHGQWG KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P52113|PRIO_CAPHI 104 2.20e-35 GQGGSHSQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|Q60506|PRIO_CRIGR 101 2.20e-35 QGGGTHNQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPML sp|Q5UJH0|PRIO_BOSGA 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|Q5UAF1|PRIO_BISBI 112 2.20e-35 GQGGTHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P49927|PRIO_PIG 105 2.20e-35 QGGGSHGQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|O18754|PRIO_FELCA 104 3.37e-35 GQGGSHSQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P40258|PRIO_SAISC 108 3.37e-35 QGGGTHNQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P61768|PRIO_PANTR 101 3.37e-35 QGGGTHSQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPII sp|P04273|PRIO_MESAU 101 3.37e-35 QGGGTHNQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPMM sp|P04156|PRIO_HUMAN 101 3.37e-35 QGGGTHSQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPII sp|Q5UJH8|PRIO_BUBBU 112 3.37e-35 GQGGTHSQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P40256|PRIO_PONPY 101 3.37e-35 QGGGTHSQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPII sp|P40252|PRIO_GORGO 101 3.37e-35 QGGGTHSQWN KPSKPKTNMKHMAGAAAAGAVVGGLGGYM LGSAMSRPII sp|Q95211|PRIO_RABIT 100 8.68e-35 GQGGTHNQWG KPSKPKTSMKHVAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P67997|PRIO_MACMU 101 1.07e-34 QGGGTHNQWH KPSKPKTSMKHMAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P67992|PRIO_MACFA 101 1.07e-34 QGGGTHNQWH KPSKPKTSMKHMAGAAAAGAVVGGLGGYM LGSAMSRPLI sp|P13852|PRIO_RAT 101 1.81e-34 QGGGTHNQWN KPSKPKTNLKHVAGAAAAGAVVGGLGGYM LGSAMSRPML sp|P04925|PRIO_MOUSE 100 1.81e-34 QGGGTHNQWN KPSKPKTNLKHVAGAAAAGAVVGGLGGYM LGSAMSRPMI sp|O46501|PRIO_CANFA 104 4.12e-34 GQGGTHSQWN KPSKPKTNMKHVAGAAAAGAVVGGLGGYL LGSAMSRPLI sp|P51780|PRIO_TRIVU 106 1.41e-33 NWGQGGYNKW KPDKPKTNLKHVAGAAAAGAVVGGLGGYM LGSAMSRPVI sp|P27177|PRIO_CHICK 114 2.66e-27 SSGGSYHNQK PWKPPKTNFKHVAGAAAAGAVVGGLGGYA MGRVMSGMNY -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|P67986|PRIO_CEREN 2.2e-35 103_[3]_124 sp|Q5UJI7|PRIO_BOSIN 2.2e-35 111_[3]_124 sp|B5SY89|PRIO_BOBOX 2.2e-35 111_[3]_124 sp|P10279|PRIO_BOVIN 2.2e-35 111_[3]_124 sp|P23907|PRIO_SHEEP 2.2e-35 103_[3]_124 sp|P40242|PRIO1_TRAST 2.2e-35 111_[3]_124 sp|Q5UJG3|PRIO_TRAIM 2.2e-35 111_[3]_124 sp|Q5UJG7|PRIO_BOSTR 2.2e-35 111_[3]_124 sp|P52114|PRIO_MUSPF 2.2e-35 104_[3]_124 sp|P52113|PRIO_CAPHI 2.2e-35 103_[3]_124 sp|Q60506|PRIO_CRIGR 2.2e-35 100_[3]_125 sp|Q5UJH0|PRIO_BOSGA 2.2e-35 111_[3]_124 sp|Q5UAF1|PRIO_BISBI 2.2e-35 111_[3]_124 sp|P49927|PRIO_PIG 2.2e-35 104_[3]_124 sp|O18754|PRIO_FELCA 3.4e-35 103_[3]_124 sp|P40258|PRIO_SAISC 3.4e-35 107_[3]_124 sp|P61768|PRIO_PANTR 3.4e-35 100_[3]_124 sp|P04273|PRIO_MESAU 3.4e-35 100_[3]_125 sp|P04156|PRIO_HUMAN 3.4e-35 100_[3]_124 sp|Q5UJH8|PRIO_BUBBU 3.4e-35 111_[3]_124 sp|P40256|PRIO_PONPY 3.4e-35 100_[3]_124 sp|P40252|PRIO_GORGO 3.4e-35 100_[3]_124 sp|Q95211|PRIO_RABIT 8.7e-35 99_[3]_124 sp|P67997|PRIO_MACMU 1.1e-34 100_[3]_124 sp|P67992|PRIO_MACFA 1.1e-34 100_[3]_124 sp|P13852|PRIO_RAT 1.8e-34 100_[3]_125 sp|P04925|PRIO_MOUSE 1.8e-34 99_[3]_126 sp|O46501|PRIO_CANFA 4.1e-34 103_[3]_123 sp|P51780|PRIO_TRIVU 1.4e-33 105_[3]_125 sp|P27177|PRIO_CHICK 2.7e-27 113_[3]_131 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KPSKPKTNMKHVAGAAAAGAVVGGLGGYM width=29 seqs=30 sp|P67986|PRIO_CEREN ( 104) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|Q5UJI7|PRIO_BOSIN ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|B5SY89|PRIO_BOBOX ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|P10279|PRIO_BOVIN ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|P23907|PRIO_SHEEP ( 104) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|P40242|PRIO1_TRAST ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|Q5UJG3|PRIO_TRAIM ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|Q5UJG7|PRIO_BOSTR ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|P52114|PRIO_MUSPF ( 105) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|P52113|PRIO_CAPHI ( 104) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|Q60506|PRIO_CRIGR ( 101) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|Q5UJH0|PRIO_BOSGA ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|Q5UAF1|PRIO_BISBI ( 112) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|P49927|PRIO_PIG ( 105) KPSKPKTNMKHVAGAAAAGAVVGGLGGYM 1 sp|O18754|PRIO_FELCA ( 104) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|P40258|PRIO_SAISC ( 108) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|P61768|PRIO_PANTR ( 101) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|P04273|PRIO_MESAU ( 101) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|P04156|PRIO_HUMAN ( 101) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|Q5UJH8|PRIO_BUBBU ( 112) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|P40256|PRIO_PONPY ( 101) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|P40252|PRIO_GORGO ( 101) KPSKPKTNMKHMAGAAAAGAVVGGLGGYM 1 sp|Q95211|PRIO_RABIT ( 100) KPSKPKTSMKHVAGAAAAGAVVGGLGGYM 1 sp|P67997|PRIO_MACMU ( 101) KPSKPKTSMKHMAGAAAAGAVVGGLGGYM 1 sp|P67992|PRIO_MACFA ( 101) KPSKPKTSMKHMAGAAAAGAVVGGLGGYM 1 sp|P13852|PRIO_RAT ( 101) KPSKPKTNLKHVAGAAAAGAVVGGLGGYM 1 sp|P04925|PRIO_MOUSE ( 100) KPSKPKTNLKHVAGAAAAGAVVGGLGGYM 1 sp|O46501|PRIO_CANFA ( 104) KPSKPKTNMKHVAGAAAAGAVVGGLGGYL 1 sp|P51780|PRIO_TRIVU ( 106) KPDKPKTNLKHVAGAAAAGAVVGGLGGYM 1 sp|P27177|PRIO_CHICK ( 114) PWKPPKTNFKHVAGAAAAGAVVGGLGGYA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 20 w= 29 n= 7687 bayes= 7.92041 E= 3.2e-756 -337 -371 -394 -372 -511 -627 -473 -378 437 -434 -473 -391 -239 -472 -64 -436 -392 -497 -585 -563 -427 -569 -488 -508 -583 -725 -639 -603 -542 -556 -677 -620 387 -618 -568 -500 -532 -619 -20 -697 -280 -351 55 -287 -471 -499 -421 -497 -50 -485 -530 -205 -503 -445 -393 393 -121 -537 -678 -532 -337 -371 -394 -372 -511 -627 -473 -378 437 -434 -473 -391 -239 -472 -64 -436 -392 -497 -585 -563 -621 -672 -615 -681 -722 -813 -761 -778 -713 -709 -854 -761 394 -784 -709 -679 -701 -797 -867 -832 -445 -471 -486 -477 -600 -708 -571 -488 444 -534 -582 -498 -611 -574 -178 -539 -498 -602 -680 -657 -639 -649 -649 -757 -737 -816 -789 -771 -774 -747 -848 -746 -767 -834 -744 -610 435 -784 -869 -839 -342 -348 -146 -344 -383 -518 -230 -334 -328 -401 -447 421 -479 -381 -378 12 -287 -431 -533 -467 -432 -378 -474 -499 -75 -710 -584 -209 -509 22 470 -554 -599 -580 -558 -496 -450 -342 -506 -441 -445 -471 -486 -477 -600 -708 -571 -488 444 -534 -582 -498 -611 -574 -178 -539 -498 -602 -680 -657 -786 -708 -664 -785 -728 -845 467 -881 -816 -778 -945 -794 -787 -843 -762 -798 -802 -908 -867 -791 -423 -411 -655 -652 -395 -843 -813 -117 -699 -242 321 -714 -755 -774 -732 -632 -459 332 -789 -655 433 -519 -636 -712 -702 -701 -774 -737 -761 -701 -788 -721 -711 -792 -719 -502 -570 -670 -854 -819 -463 -579 -455 -550 -657 256 -670 -688 -587 -676 -732 -550 -688 -712 -587 -529 -621 -697 -773 -735 433 -519 -636 -712 -702 -701 -774 -737 -761 -701 -788 -721 -711 -792 -719 -502 -570 -670 -854 -819 433 -519 -636 -712 -702 -701 -774 -737 -761 -701 -788 -721 -711 -792 -719 -502 -570 -670 -854 -819 433 -519 -636 -712 -702 -701 -774 -737 -761 -701 -788 -721 -711 -792 -719 -502 -570 -670 -854 -819 433 -519 -636 -712 -702 -701 -774 -737 -761 -701 -788 -721 -711 -792 -719 -502 -570 -670 -854 -819 -463 -579 -455 -550 -657 256 -670 -688 -587 -676 -732 -550 -688 -712 -587 -529 -621 -697 -773 -735 433 -519 -636 -712 -702 -701 -774 -737 -761 -701 -788 -721 -711 -792 -719 -502 -570 -670 -854 -819 -579 -572 -660 -740 -622 -832 -806 -343 -779 -506 -646 -787 -773 -853 -759 -719 -629 394 -871 -795 -579 -572 -660 -740 -622 -832 -806 -343 -779 -506 -646 -787 -773 -853 -759 -719 -629 394 -871 -795 -463 -579 -455 -550 -657 256 -670 -688 -587 -676 -732 -550 -688 -712 -587 -529 -621 -697 -773 -735 -463 -579 -455 -550 -657 256 -670 -688 -587 -676 -732 -550 -688 -712 -587 -529 -621 -697 -773 -735 -660 -620 -664 -724 -466 -843 -763 -426 -754 421 -465 -787 -759 -776 -714 -747 -684 -561 -774 -720 -463 -579 -455 -550 -657 256 -670 -688 -587 -676 -732 -550 -688 -712 -587 -529 -621 -697 -773 -735 -463 -579 -455 -550 -657 256 -670 -688 -587 -676 -732 -550 -688 -712 -587 -529 -621 -697 -773 -735 -748 -666 -660 -758 -392 -843 -638 -735 -774 -651 -793 -751 -779 -807 -729 -751 -758 -790 -646 430 -268 -343 -423 -453 -353 -664 -548 -216 -461 -118 476 -507 -558 -550 -521 -447 -417 -336 -474 -410 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 20 w= 29 nsites= 30 E= 3.2e-756 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.933333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.966667 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.900000 0.000000 0.000000 0.000000 0.100000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.100000 0.866667 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.666667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.033333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.033333 0.933333 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KPSKPKTNMKHVAGAAAAGAVVGGLGGYM MEME-3 regular expression -------------------------------------------------------------------------------- KPSKPKTNMKH[VM]AGAAAAGAVVGGLGGYM -------------------------------------------------------------------------------- Time 23.36 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- sp|P49927|PRIO_PIG 1.24e-139 104_[3(2.20e-35)]_4_[1(9.56e-66)]_2_\ [2(1.04e-51)]_26 sp|Q9GJY2|PRND_SHEEP 3.14e-03 62_[1(8.54e-06)]_66 sp|Q9GK16|PRND_BOVIN 7.19e-03 62_[1(4.49e-05)]_66 sp|A0RZB4|SPRN_BOVIN 2.87e-03 47_[3(6.67e-07)]_67 sp|Q5UAF1|PRIO_BISBI 3.21e-146 111_[3(2.20e-35)]_4_[1(2.58e-67)]_2_\ [2(8.30e-57)]_26 sp|Q5UJH0|PRIO_BOSGA 3.21e-146 111_[3(2.20e-35)]_4_[1(2.58e-67)]_2_\ [2(8.30e-57)]_26 sp|O46501|PRIO_CANFA 1.02e-131 103_[3(4.12e-34)]_4_[1(8.78e-61)]_1_\ [2(5.71e-50)]_26 sp|Q60506|PRIO_CRIGR 1.05e-139 100_[3(2.20e-35)]_4_[1(6.20e-63)]_2_\ [2(1.41e-54)]_27 sp|P40252|PRIO_GORGO 1.45e-143 100_[3(3.37e-35)]_4_[1(1.23e-65)]_2_\ [2(6.18e-56)]_26 sp|P67992|PRIO_MACFA 4.17e-145 100_[3(1.07e-34)]_4_[1(6.58e-68)]_2_\ [2(1.02e-55)]_26 sp|P67997|PRIO_MACMU 4.17e-145 100_[3(1.07e-34)]_4_[1(6.58e-68)]_2_\ [2(1.02e-55)]_26 sp|P40256|PRIO_PONPY 5.15e-145 100_[3(3.37e-35)]_4_[1(4.28e-67)]_2_\ [2(6.18e-56)]_26 sp|P52113|PRIO_CAPHI 3.84e-146 103_[3(2.20e-35)]_4_[1(6.58e-68)]_2_\ [2(4.34e-56)]_26 sp|Q86SH4|PRNT_HUMAN 2.51e-02 94 sp|P52114|PRIO_MUSPF 2.24e-139 104_[3(2.20e-35)]_4_[1(4.51e-64)]_2_\ [2(3.99e-53)]_26 sp|P51780|PRIO_TRIVU 6.75e-129 105_[3(1.41e-33)]_4_[1(6.00e-58)]_2_\ [2(1.60e-50)]_27 sp|Q5UJG7|PRIO_BOSTR 2.18e-141 111_[3(2.20e-35)]_4_[1(3.50e-64)]_2_\ [2(4.42e-55)]_26 sp|Q5UJH8|PRIO_BUBBU 2.24e-146 111_[3(3.37e-35)]_4_[1(1.17e-67)]_2_\ [2(8.30e-57)]_26 sp|Q5UJG3|PRIO_TRAIM 6.16e-147 111_[3(2.20e-35)]_4_[1(6.58e-68)]_2_\ [2(6.18e-57)]_26 sp|P40242|PRIO1_TRAST 1.82e-146 111_[3(2.20e-35)]_4_[1(1.96e-67)]_2_\ [2(6.18e-57)]_26 sp|Q9UKY0|PRND_HUMAN 5.85e-03 62_[1(5.63e-06)]_64 sp|P04156|PRIO_HUMAN 3.56e-142 100_[3(3.37e-35)]_4_[1(3.08e-64)]_2_\ [2(6.18e-56)]_26 sp|P04273|PRIO_MESAU 1.80e-138 100_[3(3.37e-35)]_4_[1(1.11e-62)]_2_\ [2(8.98e-54)]_27 sp|P04925|PRIO_MOUSE 3.10e-142 99_[3(1.81e-34)]_4_[1(2.15e-66)]_2_\ [2(1.41e-54)]_28 sp|P23907|PRIO_SHEEP 2.47e-144 103_[3(2.20e-35)]_4_[1(4.34e-66)]_2_\ [2(4.34e-56)]_26 sp|P10279|PRIO_BOVIN 3.21e-146 111_[3(2.20e-35)]_4_[1(2.58e-67)]_2_\ [2(8.30e-57)]_26 sp|P27177|PRIO_CHICK 1.78e-56 113_[3(2.66e-27)]_4_[1(1.51e-35)]_\ 12_[2(3.61e-06)]_23 sp|P13852|PRIO_RAT 1.10e-140 100_[3(1.81e-34)]_4_[1(7.81e-65)]_2_\ [2(1.41e-54)]_27 sp|P61768|PRIO_PANTR 8.41e-142 100_[3(3.37e-35)]_4_[1(7.31e-64)]_2_\ [2(6.18e-56)]_26 sp|B5SY89|PRIO_BOBOX 3.21e-146 111_[3(2.20e-35)]_4_[1(2.58e-67)]_2_\ [2(8.30e-57)]_26 sp|Q9QUG3|PRND_MOUSE 7.00e-04 62_[1(4.49e-06)]_67 sp|Q5UJI7|PRIO_BOSIN 3.21e-146 111_[3(2.20e-35)]_4_[1(2.58e-67)]_2_\ [2(8.30e-57)]_26 sp|Q95211|PRIO_RABIT 1.31e-141 99_[3(8.68e-35)]_4_[1(3.82e-66)]_2_\ [2(7.31e-54)]_26 sp|P40258|PRIO_SAISC 7.36e-142 107_[3(3.37e-35)]_4_[1(3.50e-64)]_2_\ [2(1.02e-55)]_26 sp|P67986|PRIO_CEREN 3.68e-144 103_[3(2.20e-35)]_4_[1(4.55e-65)]_2_\ [2(6.18e-57)]_26 sp|O18754|PRIO_FELCA 8.61e-144 103_[3(3.37e-35)]_4_[1(6.58e-68)]_2_\ [2(6.56e-54)]_26 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: node110 ********************************************************************************